Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BBS1Q8NFJ9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
BBS1Q8NFJ9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
BBS1Q8NFJ9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 VENTXP7-201ENST00000475503 772 ntBASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 PMPCAP1-201ENST00000508114 1576 ntBASIC15.24■□□□□ 0.03
BBS1Q8NFJ9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 RN7SL850P-201ENST00000579959 291 ntBASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS1Q8NFJ9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 ME2P1-201ENST00000426028 1970 ntBASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 AC004817.3-201ENST00000602957 2129 ntBASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 INTS4P1-201ENST00000438455 1935 ntBASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS1Q8NFJ9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms