Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 SCARNA2-201ENST00000458748 420 ntBASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AC139887.3-201ENST00000568585 713 ntBASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 AC008608.2-201ENST00000606089 416 ntBASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LSMEM1Q8N8F7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AL391256.1-201ENST00000443260 1855 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 SART3-203ENST00000546611 1184 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 LINC01711-201ENST00000598340 967 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 MTDHP4-201ENST00000600287 670 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AC004706.3-202ENST00000621574 984 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 AL603756.1-201ENST00000606511 2163 ntBASIC15.51■□□□□ 0.07
LSMEM1Q8N8F7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 PAWRP1-201ENST00000451083 565 ntBASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 SAPCD2P3-201ENST00000455031 850 ntBASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms