Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 AC107918.2-201ENST00000530817 355 ntBASIC15.69■□□□□ 0.1
BEST3Q8N1M1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST3Q8N1M1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC254562.1-201ENST00000417586 456 ntBASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC080080.1-201ENST00000625121 2420 ntBASIC15.68■□□□□ 0.1
BEST3Q8N1M1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC092919.2-201ENST00000623631 1645 ntBASIC15.68■□□□□ 0.1
BEST3Q8N1M1 NFIC-211ENST00000641145 8399 ntBASIC15.68■□□□□ 0.1
BEST3Q8N1M1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
BEST3Q8N1M1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 PMS2P2-201ENST00000425039 1128 ntBASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AL645608.8-201ENST00000606034 2086 ntBASIC15.67■□□□□ 0.1
BEST3Q8N1M1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
BEST3Q8N1M1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms