Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AC112191.1-201ENST00000523689 701 ntBASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AC011467.4-201ENST00000594891 528 ntBASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AC022145.2-201ENST00000598203 171 ntBASIC18.33■□□□□ 0.52
VPS52Q8N1B4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AL121761.2-201ENST00000598007 1648 ntBASIC18.33■□□□□ 0.52
VPS52Q8N1B4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS52Q8N1B4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 SLC25A6P2-201ENST00000497974 877 ntBASIC18.32■□□□□ 0.52
VPS52Q8N1B4 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS52Q8N1B4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 AC087163.2-201ENST00000457299 853 ntBASIC18.31■□□□□ 0.52
VPS52Q8N1B4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
VPS52Q8N1B4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS52Q8N1B4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS52Q8N1B4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms