Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AL355355.2-201ENST00000442321 338 ntBASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SEC1P-202ENST00000473944 940 ntBASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AC090192.1-201ENST00000517740 490 ntBASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AP005242.2-201ENST00000580065 1175 ntBASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC139749.1-202ENST00000617529 3139 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC092338.2-201ENST00000568827 1415 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC006486.2-201ENST00000624246 2199 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC007292.2-201ENST00000593524 1812 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 AC063926.3-201ENST00000624734 5658 ntBASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD2Q8IV50 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms