Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NPAS4Q8IUM7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.96■□□□□ 0.46
NPAS4Q8IUM7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 FAM220BP-201ENST00000377689 816 ntBASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 CR383656.12-201ENST00000549567 513 ntBASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 AC004233.3-201ENST00000607794 1269 ntBASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS4Q8IUM7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 SPTSSB-204ENST00000617024 1292 ntBASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 LINC02012-201ENST00000608206 1725 ntBASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS4Q8IUM7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 SPTLC1P1-201ENST00000447199 261 ntBASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms