Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 AL671710.1-201ENST00000610245 2349 ntBASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 EMBP1-201ENST00000458200 901 ntBASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 RNPS1P1-201ENST00000507437 918 ntBASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AC107918.2-201ENST00000530817 355 ntBASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 AL512652.2-201ENST00000625156 1716 ntBASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD1LQ86WJ1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AC026691.1-201ENST00000602502 2017 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 SLC22A20-204ENST00000530038 1673 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 HNRNPDP1-201ENST00000439535 754 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 OR7E14P-202ENST00000530490 1290 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 PKD1P1-201ENST00000458669 6805 ntBASIC20.83■□□□□ 0.93
CHD1LQ86WJ1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 AL391005.1-201ENST00000623953 2435 ntBASIC20.83■□□□□ 0.92
CHD1LQ86WJ1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD1LQ86WJ1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD1LQ86WJ1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD1LQ86WJ1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.82■□□□□ 0.92
CHD1LQ86WJ1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD1LQ86WJ1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms