Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 AC105339.3-201ENST00000560043 636 ntBASIC16.64■□□□□ 0.25
SYVN1Q86TM6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 FAM197Y3-203ENST00000618346 717 ntBASIC16.64■□□□□ 0.25
SYVN1Q86TM6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 SPDYE21P-201ENST00000413323 827 ntBASIC16.63■□□□□ 0.25
SYVN1Q86TM6 AL020989.1-201ENST00000422979 469 ntBASIC16.63■□□□□ 0.25
SYVN1Q86TM6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.63■□□□□ 0.25
SYVN1Q86TM6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 Z83851.2-201ENST00000609564 659 ntBASIC16.63■□□□□ 0.25
SYVN1Q86TM6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SYVN1Q86TM6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MED15P5-201ENST00000423150 992 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC012640.2-201ENST00000561606 901 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC004817.3-201ENST00000602957 2129 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AL022326.1-202ENST00000641533 845 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AL139384.1-201ENST00000612143 3047 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 AC079776.2-201ENST00000641154 1609 ntBASIC16.62■□□□□ 0.25
SYVN1Q86TM6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYVN1Q86TM6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms