Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 AC007967.3-201ENST00000434308 558 ntBASIC11.26□□□□□ -0.61
SCXQ7RTU7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 TERC-201ENST00000602385 541 ntBASIC11.26□□□□□ -0.61
SCXQ7RTU7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PP12613-201ENST00000424958 2230 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AL513477.1-201ENST00000602865 2407 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC092910.1-201ENST00000482027 1129 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC092865.5-201ENST00000545435 363 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC025062.2-201ENST00000605477 670 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC104109.2-201ENST00000602919 1418 ntBASIC11.25□□□□□ -0.61
SCXQ7RTU7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SCXQ7RTU7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCXQ7RTU7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms