Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 LINC01711-201ENST00000598340 967 ntBASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HIST3H2AQ7L7L0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIST3H2AQ7L7L0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HIST3H2AQ7L7L0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIST3H2AQ7L7L0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HIST3H2AQ7L7L0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 LINC00982-205ENST00000420957 435 ntBASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 HCG4P8-203ENST00000443049 980 ntBASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 NUS1P1-201ENST00000446295 882 ntBASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 AL021920.2-201ENST00000624828 1351 ntBASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST3H2AQ7L7L0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PRYP5-201ENST00000451909 266 ntBASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 AC073592.4-201ENST00000623827 446 ntBASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST3H2AQ7L7L0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms