Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VPS13CQ709C8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS13CQ709C8 AC022210.1-201ENST00000449856 793 ntBASIC13.89□□□□□ -0.19
VPS13CQ709C8 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS13CQ709C8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.89□□□□□ -0.19
VPS13CQ709C8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VPS13CQ709C8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13CQ709C8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13CQ709C8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 AC092658.1-201ENST00000505836 891 ntBASIC13.88□□□□□ -0.19
VPS13CQ709C8 RNA5SP423-201ENST00000517127 109 ntBASIC13.88□□□□□ -0.19
VPS13CQ709C8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 SPDYE19P-201ENST00000338590 713 ntBASIC13.88□□□□□ -0.19
VPS13CQ709C8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 AC005412.3-201ENST00000580309 715 ntBASIC13.88□□□□□ -0.19
VPS13CQ709C8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13CQ709C8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13CQ709C8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 FAM8A2P-201ENST00000528813 1142 ntBASIC13.87□□□□□ -0.19
VPS13CQ709C8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 AC098614.1-201ENST00000368528 745 ntBASIC13.87□□□□□ -0.19
VPS13CQ709C8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VPS13CQ709C8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13CQ709C8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13CQ709C8 AC023310.3-201ENST00000557027 670 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AC100756.1-201ENST00000562736 682 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AC138749.3-201ENST00000567691 622 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AL589739.1-201ENST00000607720 493 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AL133215.2-201ENST00000609242 977 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AC116165.1-201ENST00000611806 668 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 AC073592.8-201ENST00000624126 511 ntBASIC13.86□□□□□ -0.19
VPS13CQ709C8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13CQ709C8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms