Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 KRT18P56-201ENST00000507275 550 ntBASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC112497.1-201ENST00000624824 639 ntBASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 AL513523.2-202ENST00000427283 2040 ntBASIC14.81□□□□□ -0.04
C11orf88Q6PI97 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf88Q6PI97 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 KRT18P48-201ENST00000434763 852 ntBASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.8□□□□□ -0.04
C11orf88Q6PI97 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 AC022188.1-201ENST00000620960 1664 ntBASIC14.8□□□□□ -0.04
C11orf88Q6PI97 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf88Q6PI97 CYP2T1P-202ENST00000641596 2535 ntBASIC14.8□□□□□ -0.04
C11orf88Q6PI97 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms