Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 GNAS-203ENST00000306120 1878 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 AC067863.1-201ENST00000494933 530 ntBASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 DUX4L27-201ENST00000554796 1261 ntBASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 AC068880.1-201ENST00000507289 2297 ntBASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC62Q6P9F0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 RBPMS2P1-201ENST00000437762 623 ntBASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC62Q6P9F0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 MIR346-201ENST00000362234 95 ntBASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC62Q6P9F0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms