Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 FST-202ENST00000396947 2538 ntTSL 5 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 SPDYE19P-201ENST00000338590 713 ntBASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 GNAQP1-201ENST00000444815 1067 ntBASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.14■■□□□ 1.62
CDC42BPAQ5VT25 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 INE1-201ENST00000456273 945 ntBASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 AC093004.1-201ENST00000508850 424 ntBASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 AL359881.2-201ENST00000602973 570 ntBASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 PCDHB17P-201ENST00000539533 2393 ntBASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CDC42BPAQ5VT25 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 AL139011.1-202ENST00000642063 584 ntBASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 AC092068.3-201ENST00000587894 2016 ntBASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CDC42BPAQ5VT25 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 AL353779.1-201ENST00000434793 351 ntBASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 AC024267.1-201ENST00000582320 895 ntBASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42BPAQ5VT25 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AL589987.1-201ENST00000453380 819 ntBASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AC023310.3-201ENST00000557027 670 ntBASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AC100756.1-201ENST00000562736 682 ntBASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AC138749.3-201ENST00000567691 622 ntBASIC25.11■■□□□ 1.61
CDC42BPAQ5VT25 AC116165.1-201ENST00000611806 668 ntBASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms