Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC005521.1-201ENST00000393351 872 ntBASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 KLF4P1-201ENST00000412782 1185 ntBASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC090616.6-201ENST00000582640 721 ntBASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AL353801.3-201ENST00000609898 542 ntBASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 FRMD8P1-201ENST00000440433 1524 ntBASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LCN1P1Q5VSP4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 TSPY22P-201ENST00000427496 604 ntBASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 KRT18P57-201ENST00000443599 1254 ntBASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 RN7SL606P-201ENST00000472779 293 ntBASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 VENTXP7-201ENST00000475503 772 ntBASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LCN1P1Q5VSP4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AC005336.2-201ENST00000593183 939 ntBASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 IGHV3-41-201ENST00000613121 348 ntBASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AC083849.1-201ENST00000615227 514 ntBASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms