Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 TUBB8P12-201ENST00000308911 1335 ntBASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 TUBB7P-202ENST00000428444 1305 ntBASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 TUBB8P7-204ENST00000567960 1332 ntBASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 AC129492.6-201ENST00000611383 1305 ntBASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 AC002310.6-201ENST00000624451 1377 ntBASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDLRAP1Q5SW96 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 AL118508.1-201ENST00000613502 2345 ntBASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 VN2R19P-201ENST00000442399 1052 ntBASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SLC25A6P2-201ENST00000497974 877 ntBASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LDLRAP1Q5SW96 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LDLRAP1Q5SW96 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LDLRAP1Q5SW96 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDLRAP1Q5SW96 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms