Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.82■□□□□ 0.44
VARS2Q5ST30 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARS2Q5ST30 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VARS2Q5ST30 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 TUBB8P12-201ENST00000308911 1335 ntBASIC17.81■□□□□ 0.44
VARS2Q5ST30 TUBB7P-202ENST00000428444 1305 ntBASIC17.81■□□□□ 0.44
VARS2Q5ST30 TUBB8P7-204ENST00000567960 1332 ntBASIC17.81■□□□□ 0.44
VARS2Q5ST30 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 RBPMS2P1-201ENST00000437762 623 ntBASIC17.81■□□□□ 0.44
VARS2Q5ST30 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AC015911.4-201ENST00000588022 1070 ntBASIC17.81■□□□□ 0.44
VARS2Q5ST30 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARS2Q5ST30 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.81■□□□□ 0.44
VARS2Q5ST30 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VARS2Q5ST30 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARS2Q5ST30 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms