Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RBM48Q5RL73 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RBM48Q5RL73 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC006449.6-201ENST00000612330 2296 ntBASIC15.45■□□□□ 0.06
RBM48Q5RL73 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC009947.2-201ENST00000444014 672 ntBASIC15.45■□□□□ 0.06
RBM48Q5RL73 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.45■□□□□ 0.06
RBM48Q5RL73 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RBM48Q5RL73 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.44■□□□□ 0.06
RBM48Q5RL73 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 AL135999.2-201ENST00000622438 1686 ntBASIC15.44■□□□□ 0.06
RBM48Q5RL73 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RBM48Q5RL73 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RBM48Q5RL73 AC023157.3-201ENST00000619086 2088 ntBASIC15.44■□□□□ 0.06
RBM48Q5RL73 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.43■□□□□ 0.06
RBM48Q5RL73 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
RBM48Q5RL73 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.43■□□□□ 0.06
RBM48Q5RL73 AC068587.6-202ENST00000641839 5619 ntBASIC15.43■□□□□ 0.06
RBM48Q5RL73 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
RBM48Q5RL73 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RBM48Q5RL73 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms