Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC4Q5GLZ8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 DUX4L17-201ENST00000557360 1267 ntBASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 AC105339.3-201ENST00000560043 636 ntBASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 AC012640.2-201ENST00000561606 901 ntBASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC4Q5GLZ8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 TUBB8P12-201ENST00000308911 1335 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 RNF216P1-203ENST00000404404 2427 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 AL035633.1-201ENST00000406139 838 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 TUBB7P-202ENST00000428444 1305 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 PAWRP1-201ENST00000451083 565 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 AC136632.2-201ENST00000512891 861 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 TUBB8P7-204ENST00000567960 1332 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 AL805961.1-202ENST00000641562 540 ntBASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HERC4Q5GLZ8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 AP002414.3-201ENST00000589352 1468 ntBASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 AL021920.2-201ENST00000624828 1351 ntBASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC4Q5GLZ8 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms