Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.83□□□□□ -0.04
TFF3Q07654 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.83□□□□□ -0.04
TFF3Q07654 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.83□□□□□ -0.04
TFF3Q07654 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.83□□□□□ -0.04
TFF3Q07654 AL035252.4-201ENST00000624174 288 ntBASIC14.83□□□□□ -0.04
TFF3Q07654 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 AC106820.2-201ENST00000563775 3264 ntBASIC14.83□□□□□ -0.04
TFF3Q07654 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.83□□□□□ -0.04
TFF3Q07654 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.83□□□□□ -0.04
TFF3Q07654 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.83□□□□□ -0.04
TFF3Q07654 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TFF3Q07654 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TFF3Q07654 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TFF3Q07654 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TFF3Q07654 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.82□□□□□ -0.04
TFF3Q07654 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TFF3Q07654 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.82□□□□□ -0.04
TFF3Q07654 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 TREML5P-201ENST00000421694 576 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 AC005034.1-201ENST00000426657 489 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 FAM207CP-201ENST00000443486 507 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.82□□□□□ -0.04
TFF3Q07654 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.82□□□□□ -0.04
TFF3Q07654 IGHV3-62-201ENST00000520057 340 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 AC012645.4-201ENST00000610691 1061 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TFF3Q07654 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TFF3Q07654 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TFF3Q07654 AC012569.1-201ENST00000591191 1524 ntBASIC14.82□□□□□ -0.04
TFF3Q07654 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
TFF3Q07654 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.81□□□□□ -0.04
TFF3Q07654 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TFF3Q07654 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TFF3Q07654 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TFF3Q07654 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TFF3Q07654 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.81□□□□□ -0.04
TFF3Q07654 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.81□□□□□ -0.04
TFF3Q07654 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.81□□□□□ -0.04
TFF3Q07654 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.81□□□□□ -0.04
TFF3Q07654 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 AC005225.4-201ENST00000557330 545 ntBASIC14.81□□□□□ -0.04
TFF3Q07654 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TFF3Q07654 AL158211.3-201ENST00000607385 239 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms