Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDR2Q01850 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.03■□□□□ 0.48
CDR2Q01850 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.03■□□□□ 0.48
CDR2Q01850 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 AC002310.6-201ENST00000624451 1377 ntBASIC18.03■□□□□ 0.48
CDR2Q01850 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDR2Q01850 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.02■□□□□ 0.48
CDR2Q01850 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDR2Q01850 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.02■□□□□ 0.48
CDR2Q01850 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.02■□□□□ 0.48
CDR2Q01850 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.02■□□□□ 0.48
CDR2Q01850 RNPS1P1-201ENST00000507437 918 ntBASIC18.02■□□□□ 0.48
CDR2Q01850 AC073648.2-201ENST00000510116 352 ntBASIC18.02■□□□□ 0.48
CDR2Q01850 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.02■□□□□ 0.48
CDR2Q01850 OR7E14P-202ENST00000530490 1290 ntBASIC18.02■□□□□ 0.48
CDR2Q01850 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.02■□□□□ 0.48
CDR2Q01850 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.02■□□□□ 0.48
CDR2Q01850 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.02■□□□□ 0.48
CDR2Q01850 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDR2Q01850 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CDR2Q01850 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.02■□□□□ 0.48
CDR2Q01850 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.02■□□□□ 0.48
CDR2Q01850 TP73-AS1-207ENST00000624167 988 ntBASIC18.02■□□□□ 0.48
CDR2Q01850 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
CDR2Q01850 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDR2Q01850 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDR2Q01850 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDR2Q01850 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDR2Q01850 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDR2Q01850 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDR2Q01850 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDR2Q01850 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.01■□□□□ 0.47
CDR2Q01850 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.01■□□□□ 0.47
CDR2Q01850 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
CDR2Q01850 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDR2Q01850 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDR2Q01850 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 AC073621.1-201ENST00000392730 636 ntBASIC18.01■□□□□ 0.47
CDR2Q01850 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.01■□□□□ 0.47
CDR2Q01850 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.01■□□□□ 0.47
CDR2Q01850 REXO1L3P-201ENST00000622202 1288 ntBASIC18.01■□□□□ 0.47
CDR2Q01850 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDR2Q01850 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDR2Q01850 AC018695.7-201ENST00000624587 2492 ntBASIC18■□□□□ 0.47
CDR2Q01850 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDR2Q01850 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDR2Q01850 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDR2Q01850 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18■□□□□ 0.47
CDR2Q01850 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDR2Q01850 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CDR2Q01850 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CDR2Q01850 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDR2Q01850 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18■□□□□ 0.47
CDR2Q01850 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18■□□□□ 0.47
CDR2Q01850 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18■□□□□ 0.47
CDR2Q01850 HLA-J-202ENST00000469281 1241 ntBASIC18■□□□□ 0.47
CDR2Q01850 SLC25A6P2-201ENST00000497974 877 ntBASIC18■□□□□ 0.47
CDR2Q01850 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18■□□□□ 0.47
CDR2Q01850 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18■□□□□ 0.47
CDR2Q01850 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDR2Q01850 AL121912.1-201ENST00000603683 238 ntBASIC18■□□□□ 0.47
CDR2Q01850 AL139011.1-202ENST00000642063 584 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms