Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA4P78363 LINC01451-201ENST00000623792 534 ntBASIC14.51□□□□□ -0.09
ABCA4P78363 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ABCA4P78363 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCA4P78363 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA4P78363 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA4P78363 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCA4P78363 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCA4P78363 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 MIR943-201ENST00000401286 94 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCA4P78363 SPDYE7P-202ENST00000420373 878 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCA4P78363 AC026120.1-201ENST00000611536 926 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 AL161645.1-201ENST00000622716 1255 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
ABCA4P78363 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ABCA4P78363 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCA4P78363 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCA4P78363 MIR3909-201ENST00000579518 119 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 AC005412.3-201ENST00000580309 715 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 AC131009.4-201ENST00000624048 1740 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCA4P78363 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 TUBB3P1-201ENST00000405796 1332 ntBASIC14.5□□□□□ -0.09
ABCA4P78363 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ABCA4P78363 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCA4P78363 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA4P78363 NME2P1-201ENST00000426182 414 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 AC125807.1-201ENST00000483097 614 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA4P78363 AC109635.5-201ENST00000533593 962 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA4P78363 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA4P78363 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA4P78363 RN7SL692P-201ENST00000464677 288 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA4P78363 AC091167.2-201ENST00000579581 588 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 MIR4453-201ENST00000584019 89 ntBASIC14.49□□□□□ -0.09
ABCA4P78363 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA4P78363 AC134043.2-201ENST00000624206 2238 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms