Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRPFP62306 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
SNRPFP62306 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPFP62306 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNRPFP62306 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPFP62306 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SNRPFP62306 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.31■□□□□ 0.52
SNRPFP62306 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.31■□□□□ 0.52
SNRPFP62306 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
SNRPFP62306 SLC25A1P1-201ENST00000528351 927 ntBASIC18.31■□□□□ 0.52
SNRPFP62306 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SNRPFP62306 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRPFP62306 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.31■□□□□ 0.52
SNRPFP62306 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPFP62306 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 AL512652.2-201ENST00000625156 1716 ntBASIC18.31■□□□□ 0.52
SNRPFP62306 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPFP62306 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPFP62306 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNRPFP62306 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.3■□□□□ 0.52
SNRPFP62306 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.3■□□□□ 0.52
SNRPFP62306 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SNRPFP62306 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SNRPFP62306 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRPFP62306 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPFP62306 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRPFP62306 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNRPFP62306 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SNRPFP62306 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRPFP62306 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRPFP62306 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRPFP62306 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNRPFP62306 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNRPFP62306 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SNRPFP62306 RNU1-129P-201ENST00000384064 167 ntBASIC18.29■□□□□ 0.52
SNRPFP62306 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.29■□□□□ 0.52
SNRPFP62306 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.29■□□□□ 0.52
SNRPFP62306 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.29■□□□□ 0.52
SNRPFP62306 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRPFP62306 RNA5SP416-201ENST00000516838 111 ntBASIC18.29■□□□□ 0.52
SNRPFP62306 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SNRPFP62306 U1.21-201ENST00000580816 167 ntBASIC18.29■□□□□ 0.52
SNRPFP62306 AC021097.1-201ENST00000607902 574 ntBASIC18.29■□□□□ 0.52
SNRPFP62306 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNRPFP62306 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRPFP62306 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms