Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 AF228730.7-201ENST00000641842 219 ntBASIC15.54■□□□□ 0.08
CLDN20P56880 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 AC026691.1-201ENST00000602502 2017 ntBASIC15.54■□□□□ 0.08
CLDN20P56880 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CLDN20P56880 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN20P56880 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 RPL13AP23-201ENST00000480739 586 ntBASIC15.53■□□□□ 0.08
CLDN20P56880 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN20P56880 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN20P56880 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN20P56880 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN20P56880 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CLDN20P56880 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN20P56880 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN20P56880 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN20P56880 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN20P56880 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN20P56880 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLDN20P56880 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLDN20P56880 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN20P56880 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN20P56880 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CLDN20P56880 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN20P56880 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 RNA5SP415-201ENST00000517246 115 ntBASIC15.52■□□□□ 0.08
CLDN20P56880 UNC93B6-202ENST00000528242 690 ntBASIC15.52■□□□□ 0.08
CLDN20P56880 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN20P56880 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN20P56880 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN20P56880 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN20P56880 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN20P56880 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN20P56880 AC005593.1-201ENST00000624894 515 ntBASIC15.52■□□□□ 0.08
CLDN20P56880 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN20P56880 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN20P56880 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN20P56880 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN20P56880 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms