Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.59■□□□□ 0.89
PDE1AP54750 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDE1AP54750 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE1AP54750 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE1AP54750 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDE1AP54750 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.58■□□□□ 0.89
PDE1AP54750 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.58■□□□□ 0.89
PDE1AP54750 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.58■□□□□ 0.89
PDE1AP54750 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PDE1AP54750 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PDE1AP54750 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE1AP54750 FAM185BP-201ENST00000443595 716 ntBASIC20.58■□□□□ 0.89
PDE1AP54750 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE1AP54750 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE1AP54750 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE1AP54750 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.58■□□□□ 0.88
PDE1AP54750 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE1AP54750 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDE1AP54750 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.58■□□□□ 0.88
PDE1AP54750 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE1AP54750 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE1AP54750 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PDE1AP54750 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE1AP54750 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 KRT8P39-201ENST00000396270 1433 ntBASIC20.57■□□□□ 0.88
PDE1AP54750 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 FDX1P1-201ENST00000449115 551 ntBASIC20.57■□□□□ 0.88
PDE1AP54750 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDE1AP54750 AC093909.1-201ENST00000504731 1122 ntBASIC20.57■□□□□ 0.88
PDE1AP54750 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE1AP54750 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE1AP54750 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE1AP54750 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 AC079328.2-201ENST00000561241 3354 ntBASIC20.57■□□□□ 0.88
PDE1AP54750 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE1AP54750 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE1AP54750 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1AP54750 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
PDE1AP54750 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
PDE1AP54750 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE1AP54750 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1AP54750 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE1AP54750 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1AP54750 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 AL662844.4-201ENST00000606367 2838 ntBASIC20.56■□□□□ 0.88
PDE1AP54750 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PDE1AP54750 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.56■□□□□ 0.88
PDE1AP54750 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDE1AP54750 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE1AP54750 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE1AP54750 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE1AP54750 IGLL3P-201ENST00000412472 434 ntBASIC20.56■□□□□ 0.88
PDE1AP54750 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.56■□□□□ 0.88
PDE1AP54750 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PDE1AP54750 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE1AP54750 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE1AP54750 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.56■□□□□ 0.88
PDE1AP54750 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1AP54750 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1AP54750 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1AP54750 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1AP54750 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms