Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC16.8■□□□□ 0.28
NUBP1P53384 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 GPR182-203ENST00000622922 591 ntBASIC16.8■□□□□ 0.28
NUBP1P53384 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 MIR1908-201ENST00000410394 80 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.79■□□□□ 0.28
NUBP1P53384 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 MYCLP2-201ENST00000449268 967 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 RN7SL618P-201ENST00000477850 296 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 RPL23AP68-201ENST00000480924 445 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC16.79■□□□□ 0.28
NUBP1P53384 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 AL583810.1-201ENST00000553344 1045 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.79■□□□□ 0.28
NUBP1P53384 AC097376.1-201ENST00000602907 997 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 AC021097.1-201ENST00000607902 574 ntBASIC16.79■□□□□ 0.28
NUBP1P53384 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NUBP1P53384 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
NUBP1P53384 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.79■□□□□ 0.28
NUBP1P53384 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NUBP1P53384 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUBP1P53384 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.78■□□□□ 0.28
NUBP1P53384 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 AC114501.2-201ENST00000439631 535 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 MTND6P24-201ENST00000440466 518 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 AL355994.2-201ENST00000447882 704 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 BNIP3P42-201ENST00000454982 569 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 MTND1P6-201ENST00000523621 946 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.78■□□□□ 0.28
NUBP1P53384 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 BNIP3P29-201ENST00000598302 571 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 AC007620.3-201ENST00000608131 497 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 AC011447.5-201ENST00000616168 564 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 FO681491.1-202ENST00000623392 737 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.78■□□□□ 0.28
NUBP1P53384 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 LETM1P2-201ENST00000597330 2178 ntBASIC16.78■□□□□ 0.28
NUBP1P53384 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUBP1P53384 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.78■□□□□ 0.28
NUBP1P53384 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms