Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLCSP50747 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLCSP50747 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLCSP50747 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HLCSP50747 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 AC079776.2-201ENST00000641154 1609 ntBASIC16.21■□□□□ 0.19
HLCSP50747 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HLCSP50747 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.21■□□□□ 0.19
HLCSP50747 AP000347.1-202ENST00000435868 847 ntBASIC16.21■□□□□ 0.19
HLCSP50747 HNRNPDP1-201ENST00000439535 754 ntBASIC16.21■□□□□ 0.19
HLCSP50747 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 AC120114.3-201ENST00000611923 658 ntBASIC16.21■□□□□ 0.19
HLCSP50747 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.21■□□□□ 0.19
HLCSP50747 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.21■□□□□ 0.19
HLCSP50747 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLCSP50747 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLCSP50747 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLCSP50747 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLCSP50747 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HLCSP50747 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLCSP50747 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 IL9RP2-201ENST00000423948 1312 ntBASIC16.2■□□□□ 0.18
HLCSP50747 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 AC105917.1-201ENST00000506637 2539 ntBASIC16.2■□□□□ 0.18
HLCSP50747 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 BX276092.7-203ENST00000637198 1536 ntBASIC16.2■□□□□ 0.18
HLCSP50747 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.2■□□□□ 0.18
HLCSP50747 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 AC132872.4-202ENST00000622924 2756 ntBASIC16.2■□□□□ 0.18
HLCSP50747 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HLCSP50747 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.2■□□□□ 0.18
HLCSP50747 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLCSP50747 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.2■□□□□ 0.18
HLCSP50747 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 AC139887.3-201ENST00000568585 713 ntBASIC16.2■□□□□ 0.18
HLCSP50747 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.2■□□□□ 0.18
HLCSP50747 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.2■□□□□ 0.18
HLCSP50747 MTDHP4-201ENST00000600287 670 ntBASIC16.2■□□□□ 0.18
HLCSP50747 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.2■□□□□ 0.18
HLCSP50747 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms