Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 AL353692.3-201ENST00000407031 1396 ntBASIC13.89□□□□□ -0.19
NKX2-1P43699 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 RASA4DP-201ENST00000460726 1199 ntBASIC13.89□□□□□ -0.19
NKX2-1P43699 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX2-1P43699 GCSHP2-201ENST00000560971 527 ntBASIC13.89□□□□□ -0.19
NKX2-1P43699 AC079602.3-201ENST00000623931 403 ntBASIC13.89□□□□□ -0.19
NKX2-1P43699 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX2-1P43699 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-1P43699 ME2P1-201ENST00000426028 1970 ntBASIC13.89□□□□□ -0.19
NKX2-1P43699 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-1P43699 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-1P43699 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NKX2-1P43699 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 MMP23A-201ENST00000234610 1017 ntBASIC13.88□□□□□ -0.19
NKX2-1P43699 IGHGP-201ENST00000390555 1178 ntBASIC13.88□□□□□ -0.19
NKX2-1P43699 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 ECEL1P3-201ENST00000427961 737 ntBASIC13.88□□□□□ -0.19
NKX2-1P43699 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NKX2-1P43699 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.88□□□□□ -0.19
NKX2-1P43699 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX2-1P43699 NAPSB-206ENST00000562112 1266 ntBASIC13.88□□□□□ -0.19
NKX2-1P43699 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 FAM87A-204ENST00000613235 858 ntBASIC13.88□□□□□ -0.19
NKX2-1P43699 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-1P43699 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-1P43699 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-1P43699 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-1P43699 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-1P43699 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-1P43699 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-1P43699 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-1P43699 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-1P43699 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms