Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNCAP37840 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 AC046185.3-201ENST00000623228 1824 ntBASIC13.97□□□□□ -0.17
SNCAP37840 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.97□□□□□ -0.17
SNCAP37840 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 AC144831.1-201ENST00000573312 2656 ntBASIC13.97□□□□□ -0.17
SNCAP37840 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.97□□□□□ -0.17
SNCAP37840 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.97□□□□□ -0.17
SNCAP37840 AC093827.2-201ENST00000512654 315 ntBASIC13.97□□□□□ -0.17
SNCAP37840 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.97□□□□□ -0.17
SNCAP37840 AL139327.4-201ENST00000612362 153 ntBASIC13.97□□□□□ -0.17
SNCAP37840 AC005363.2-201ENST00000618631 242 ntBASIC13.97□□□□□ -0.17
SNCAP37840 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNCAP37840 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 AL365209.1-201ENST00000624418 6473 ntBASIC13.97□□□□□ -0.17
SNCAP37840 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.97□□□□□ -0.17
SNCAP37840 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SNCAP37840 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNCAP37840 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SNCAP37840 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SNCAP37840 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SNCAP37840 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SNCAP37840 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.96□□□□□ -0.17
SNCAP37840 AL596275.1-201ENST00000423464 877 ntBASIC13.96□□□□□ -0.17
SNCAP37840 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 AC010203.1-204ENST00000548782 407 ntBASIC13.96□□□□□ -0.17
SNCAP37840 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.96□□□□□ -0.17
SNCAP37840 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.96□□□□□ -0.17
SNCAP37840 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.96□□□□□ -0.17
SNCAP37840 AC011558.1-201ENST00000623459 338 ntBASIC13.96□□□□□ -0.17
SNCAP37840 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNCAP37840 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SNCAP37840 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNCAP37840 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNCAP37840 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNCAP37840 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
SNCAP37840 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNCAP37840 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SNCAP37840 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SNCAP37840 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNCAP37840 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SNCAP37840 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms