Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.74■□□□□ 0.91
TM4SF1P30408 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.74■□□□□ 0.91
TM4SF1P30408 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.73■□□□□ 0.91
TM4SF1P30408 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.73■□□□□ 0.91
TM4SF1P30408 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TM4SF1P30408 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.73■□□□□ 0.91
TM4SF1P30408 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.73■□□□□ 0.91
TM4SF1P30408 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.73■□□□□ 0.91
TM4SF1P30408 RN7SL618P-201ENST00000477850 296 ntBASIC20.73■□□□□ 0.91
TM4SF1P30408 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.73■□□□□ 0.91
TM4SF1P30408 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TM4SF1P30408 RAB43P1-201ENST00000561790 589 ntBASIC20.73■□□□□ 0.91
TM4SF1P30408 MIR4259-201ENST00000584466 101 ntBASIC20.73■□□□□ 0.91
TM4SF1P30408 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TM4SF1P30408 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.73■□□□□ 0.91
TM4SF1P30408 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 AL671710.1-201ENST00000610245 2349 ntBASIC20.73■□□□□ 0.91
TM4SF1P30408 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
TM4SF1P30408 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TM4SF1P30408 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
TM4SF1P30408 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF1P30408 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.73■□□□□ 0.91
TM4SF1P30408 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 RN7SL837P-201ENST00000463010 287 ntBASIC20.72■□□□□ 0.91
TM4SF1P30408 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.72■□□□□ 0.91
TM4SF1P30408 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.72■□□□□ 0.91
TM4SF1P30408 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.72■□□□□ 0.91
TM4SF1P30408 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.72■□□□□ 0.91
TM4SF1P30408 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
TM4SF1P30408 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF1P30408 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.72■□□□□ 0.91
TM4SF1P30408 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF1P30408 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF1P30408 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TM4SF1P30408 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF1P30408 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF1P30408 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF1P30408 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF1P30408 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF1P30408 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF1P30408 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF1P30408 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF1P30408 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF1P30408 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF1P30408 SRD5A3P1-201ENST00000603021 949 ntBASIC20.71■□□□□ 0.91
TM4SF1P30408 AC007431.3-201ENST00000623221 587 ntBASIC20.71■□□□□ 0.91
TM4SF1P30408 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF1P30408 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF1P30408 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF1P30408 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF1P30408 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF1P30408 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TM4SF1P30408 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
TM4SF1P30408 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 AC119751.2-201ENST00000504529 210 ntBASIC20.7■□□□□ 0.9
TM4SF1P30408 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.7■□□□□ 0.9
TM4SF1P30408 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms