Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CAPN3P20807 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 KLF4P1-201ENST00000412782 1185 ntBASIC16.31■□□□□ 0.2
CAPN3P20807 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN3P20807 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 DUX4L17-201ENST00000557360 1267 ntBASIC16.31■□□□□ 0.2
CAPN3P20807 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CAPN3P20807 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CAPN3P20807 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CAPN3P20807 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN3P20807 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN3P20807 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN3P20807 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN3P20807 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN3P20807 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN3P20807 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN3P20807 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN3P20807 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN3P20807 DRAXINP1-201ENST00000437611 948 ntBASIC16.3■□□□□ 0.2
CAPN3P20807 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPN3P20807 AP002469.2-201ENST00000531724 424 ntBASIC16.3■□□□□ 0.2
CAPN3P20807 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
CAPN3P20807 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN3P20807 SLC25A6P4-201ENST00000586535 553 ntBASIC16.3■□□□□ 0.2
CAPN3P20807 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPN3P20807 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPN3P20807 AD001527.2-201ENST00000622994 785 ntBASIC16.3■□□□□ 0.2
CAPN3P20807 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN3P20807 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN3P20807 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN3P20807 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN3P20807 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN3P20807 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN3P20807 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN3P20807 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms