Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RN7SL471P-201ENST00000580476 299 ntBASIC17.56■□□□□ 0.4
H2AFXP16104 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.56■□□□□ 0.4
H2AFXP16104 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.56■□□□□ 0.4
H2AFXP16104 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H2AFXP16104 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2AFXP16104 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
H2AFXP16104 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
H2AFXP16104 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2AFXP16104 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
H2AFXP16104 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
H2AFXP16104 AC097374.2-201ENST00000618617 1306 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 LINC01101-201ENST00000622953 1884 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 CICP23-201ENST00000605013 2741 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.55■□□□□ 0.4
H2AFXP16104 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
H2AFXP16104 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 TSPY12P-201ENST00000421279 868 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 SLC25A1P2-201ENST00000430693 912 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.55■□□□□ 0.4
H2AFXP16104 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 AC024563.2-201ENST00000603282 481 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 AC004263.2-201ENST00000617183 678 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
H2AFXP16104 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.55■□□□□ 0.4
H2AFXP16104 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
H2AFXP16104 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H2AFXP16104 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2AFXP16104 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
H2AFXP16104 AC092338.2-201ENST00000568827 1415 ntBASIC17.55■□□□□ 0.4
H2AFXP16104 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.55■□□□□ 0.4
H2AFXP16104 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.55■□□□□ 0.4
H2AFXP16104 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
H2AFXP16104 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
H2AFXP16104 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
H2AFXP16104 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.54■□□□□ 0.4
H2AFXP16104 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
H2AFXP16104 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.54■□□□□ 0.4
H2AFXP16104 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2AFXP16104 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.54■□□□□ 0.4
H2AFXP16104 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
H2AFXP16104 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.53■□□□□ 0.4
H2AFXP16104 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.53■□□□□ 0.4
H2AFXP16104 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
H2AFXP16104 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2AFXP16104 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms