Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.85■□□□□ 0.13
CCL4P13236 AC241585.1-201ENST00000433527 519 ntBASIC15.85■□□□□ 0.13
CCL4P13236 AC244107.1-201ENST00000442033 332 ntBASIC15.85■□□□□ 0.13
CCL4P13236 KRT18P34-201ENST00000488218 1270 ntBASIC15.85■□□□□ 0.13
CCL4P13236 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.85■□□□□ 0.13
CCL4P13236 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 RARRES2P9-201ENST00000565168 469 ntBASIC15.85■□□□□ 0.13
CCL4P13236 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.85■□□□□ 0.13
CCL4P13236 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 AC018529.1-201ENST00000613063 361 ntBASIC15.85■□□□□ 0.13
CCL4P13236 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL4P13236 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.85■□□□□ 0.13
CCL4P13236 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL4P13236 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL4P13236 AC018470.1-201ENST00000624790 3129 ntBASIC15.85■□□□□ 0.13
CCL4P13236 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL4P13236 AC108860.2-201ENST00000562760 2183 ntBASIC15.85■□□□□ 0.13
CCL4P13236 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 AC004890.2-204ENST00000481968 304 ntBASIC15.84■□□□□ 0.13
CCL4P13236 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.84■□□□□ 0.13
CCL4P13236 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 AC105233.2-201ENST00000523697 349 ntBASIC15.84■□□□□ 0.13
CCL4P13236 AF228730.5-201ENST00000530288 346 ntBASIC15.84■□□□□ 0.13
CCL4P13236 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.84■□□□□ 0.13
CCL4P13236 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.84■□□□□ 0.13
CCL4P13236 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCL4P13236 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL4P13236 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL4P13236 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CCL4P13236 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL4P13236 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL4P13236 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCL4P13236 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CCL4P13236 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL4P13236 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCL4P13236 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL4P13236 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.83■□□□□ 0.12
CCL4P13236 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.83■□□□□ 0.12
CCL4P13236 AC012645.4-201ENST00000610691 1061 ntBASIC15.83■□□□□ 0.12
CCL4P13236 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCL4P13236 AC073592.8-201ENST00000624126 511 ntBASIC15.83■□□□□ 0.12
CCL4P13236 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CCL4P13236 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL4P13236 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCL4P13236 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL4P13236 AC007613.1-201ENST00000572811 2597 ntBASIC15.82■□□□□ 0.12
CCL4P13236 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms