Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DMDP11532 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DMDP11532 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.42■□□□□ 0.22
DMDP11532 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.42■□□□□ 0.22
DMDP11532 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.42■□□□□ 0.22
DMDP11532 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.42■□□□□ 0.22
DMDP11532 WFDC1-204ENST00000613603 549 ntBASIC16.42■□□□□ 0.22
DMDP11532 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.42■□□□□ 0.22
DMDP11532 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DMDP11532 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.42■□□□□ 0.22
DMDP11532 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 FAM220BP-201ENST00000377689 816 ntBASIC16.41■□□□□ 0.22
DMDP11532 MTND6P24-201ENST00000440466 518 ntBASIC16.41■□□□□ 0.22
DMDP11532 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 BTBD6P1-201ENST00000412176 1267 ntBASIC16.41■□□□□ 0.22
DMDP11532 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.41■□□□□ 0.22
DMDP11532 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.41■□□□□ 0.22
DMDP11532 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DMDP11532 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DMDP11532 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DMDP11532 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.4■□□□□ 0.22
DMDP11532 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.4■□□□□ 0.22
DMDP11532 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 AC015967.2-201ENST00000624092 234 ntBASIC16.4■□□□□ 0.22
DMDP11532 AC006435.4-201ENST00000625037 234 ntBASIC16.4■□□□□ 0.22
DMDP11532 AL356737.1-201ENST00000634391 234 ntBASIC16.4■□□□□ 0.22
DMDP11532 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.4■□□□□ 0.22
DMDP11532 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 AC105021.1-202ENST00000570572 669 ntBASIC16.4■□□□□ 0.22
DMDP11532 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.4■□□□□ 0.22
DMDP11532 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DMDP11532 FZD10-202ENST00000539839 3282 ntBASIC16.4■□□□□ 0.22
DMDP11532 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
DMDP11532 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.4■□□□□ 0.22
DMDP11532 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.4■□□□□ 0.22
DMDP11532 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.4■□□□□ 0.22
DMDP11532 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DMDP11532 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
DMDP11532 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
DMDP11532 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.39■□□□□ 0.21
DMDP11532 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.39■□□□□ 0.21
DMDP11532 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.39■□□□□ 0.21
DMDP11532 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.39■□□□□ 0.21
DMDP11532 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.39■□□□□ 0.21
DMDP11532 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
DMDP11532 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.39■□□□□ 0.21
DMDP11532 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
DMDP11532 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DMDP11532 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.39■□□□□ 0.21
DMDP11532 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms