Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP1P11387 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.83■□□□□ 0.77
TOP1P11387 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP1P11387 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 NKILA-202ENST00000614771 2598 ntBASIC19.83■□□□□ 0.77
TOP1P11387 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.83■□□□□ 0.77
TOP1P11387 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.83■□□□□ 0.77
TOP1P11387 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
TOP1P11387 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP1P11387 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP1P11387 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TOP1P11387 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP1P11387 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.83■□□□□ 0.76
TOP1P11387 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TOP1P11387 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TOP1P11387 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TOP1P11387 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.82■□□□□ 0.76
TOP1P11387 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.82■□□□□ 0.76
TOP1P11387 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TOP1P11387 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.82■□□□□ 0.76
TOP1P11387 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 AC055717.3-201ENST00000622967 595 ntBASIC19.82■□□□□ 0.76
TOP1P11387 C20orf181-201ENST00000623918 480 ntBASIC19.82■□□□□ 0.76
TOP1P11387 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 AC011676.5-201ENST00000624864 2660 ntBASIC19.82■□□□□ 0.76
TOP1P11387 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 AC092053.1-201ENST00000605787 1936 ntBASIC19.82■□□□□ 0.76
TOP1P11387 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.82■□□□□ 0.76
TOP1P11387 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.82■□□□□ 0.76
TOP1P11387 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TOP1P11387 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TOP1P11387 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.81■□□□□ 0.76
TOP1P11387 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
TOP1P11387 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TOP1P11387 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TOP1P11387 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.81■□□□□ 0.76
TOP1P11387 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.81■□□□□ 0.76
TOP1P11387 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.81■□□□□ 0.76
TOP1P11387 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.81■□□□□ 0.76
TOP1P11387 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.81■□□□□ 0.76
TOP1P11387 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.81■□□□□ 0.76
TOP1P11387 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 MIR4515-201ENST00000584082 81 ntBASIC19.81■□□□□ 0.76
TOP1P11387 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 AL645728.2-201ENST00000641974 660 ntBASIC19.81■□□□□ 0.76
TOP1P11387 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.81■□□□□ 0.76
TOP1P11387 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TOP1P11387 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms