Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD48P09326 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD48P09326 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 AF186996.4-201ENST00000467186 377 ntBASIC17.5■□□□□ 0.39
CD48P09326 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.5■□□□□ 0.39
CD48P09326 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CD48P09326 AC107918.2-201ENST00000530817 355 ntBASIC17.5■□□□□ 0.39
CD48P09326 AP002469.2-201ENST00000531724 424 ntBASIC17.5■□□□□ 0.39
CD48P09326 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CD48P09326 KRT126P-201ENST00000549467 1181 ntBASIC17.5■□□□□ 0.39
CD48P09326 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.5■□□□□ 0.39
CD48P09326 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.5■□□□□ 0.39
CD48P09326 AL356488.2-201ENST00000602755 427 ntBASIC17.5■□□□□ 0.39
CD48P09326 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 AC013467.2-201ENST00000605472 835 ntBASIC17.5■□□□□ 0.39
CD48P09326 FAM215A-202ENST00000632077 792 ntBASIC17.5■□□□□ 0.39
CD48P09326 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.5■□□□□ 0.39
CD48P09326 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD48P09326 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
CD48P09326 AC011270.2-201ENST00000624293 2550 ntBASIC17.5■□□□□ 0.39
CD48P09326 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.5■□□□□ 0.39
CD48P09326 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.5■□□□□ 0.39
CD48P09326 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
CD48P09326 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 AC004870.1-201ENST00000315132 882 ntBASIC17.49■□□□□ 0.39
CD48P09326 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.49■□□□□ 0.39
CD48P09326 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.49■□□□□ 0.39
CD48P09326 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.49■□□□□ 0.39
CD48P09326 AC105339.3-201ENST00000560043 636 ntBASIC17.49■□□□□ 0.39
CD48P09326 MPDU1-223ENST00000582151 728 ntBASIC17.49■□□□□ 0.39
CD48P09326 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD48P09326 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CD48P09326 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.49■□□□□ 0.39
CD48P09326 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD48P09326 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 SLC22A20-204ENST00000530038 1673 ntBASIC17.48■□□□□ 0.39
CD48P09326 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD48P09326 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.48■□□□□ 0.39
CD48P09326 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms