Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.04■□□□□ 0.32
RETP07949 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RETP07949 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
RETP07949 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
RETP07949 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.04■□□□□ 0.32
RETP07949 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RETP07949 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RETP07949 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.03■□□□□ 0.32
RETP07949 AC099398.1-201ENST00000567919 2776 ntBASIC17.03■□□□□ 0.32
RETP07949 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.03■□□□□ 0.32
RETP07949 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
RETP07949 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
RETP07949 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RETP07949 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RETP07949 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RETP07949 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.03■□□□□ 0.32
RETP07949 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.03■□□□□ 0.32
RETP07949 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.03■□□□□ 0.32
RETP07949 AL645728.2-201ENST00000641974 660 ntBASIC17.03■□□□□ 0.32
RETP07949 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.03■□□□□ 0.32
RETP07949 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RETP07949 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.02■□□□□ 0.32
RETP07949 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 AC129492.6-201ENST00000611383 1305 ntBASIC17.02■□□□□ 0.32
RETP07949 BX276092.7-203ENST00000637198 1536 ntBASIC17.02■□□□□ 0.32
RETP07949 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.02■□□□□ 0.32
RETP07949 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.02■□□□□ 0.32
RETP07949 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 AD000864.1-201ENST00000624076 2295 ntBASIC17.02■□□□□ 0.32
RETP07949 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RETP07949 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.02■□□□□ 0.32
RETP07949 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.02■□□□□ 0.32
RETP07949 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.02■□□□□ 0.32
RETP07949 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RETP07949 AL596325.1-201ENST00000563991 1082 ntBASIC17.02■□□□□ 0.32
RETP07949 AL135744.1-201ENST00000565098 629 ntBASIC17.02■□□□□ 0.32
RETP07949 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.02■□□□□ 0.32
RETP07949 AC116407.2-201ENST00000613639 860 ntBASIC17.02■□□□□ 0.32
RETP07949 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RETP07949 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RETP07949 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RETP07949 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RETP07949 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RETP07949 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RETP07949 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RETP07949 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RETP07949 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RETP07949 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RETP07949 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.01■□□□□ 0.31
RETP07949 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.01■□□□□ 0.31
RETP07949 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RETP07949 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RETP07949 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RETP07949 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RETP07949 PIN1P1-201ENST00000412108 996 ntBASIC17.01■□□□□ 0.31
RETP07949 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.01■□□□□ 0.31
RETP07949 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RETP07949 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.01■□□□□ 0.31
RETP07949 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
RETP07949 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.01■□□□□ 0.31
RETP07949 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.01■□□□□ 0.31
RETP07949 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms