Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 AC107890.1-201ENST00000422478 521 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.6■□□□□ 0.89
CSF1RP07333 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 PRYP6-201ENST00000514804 343 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.6■□□□□ 0.89
CSF1RP07333 RARRES2P9-201ENST00000565168 469 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.6■□□□□ 0.89
CSF1RP07333 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.6■□□□□ 0.89
CSF1RP07333 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 AC092364.2-202ENST00000597012 1073 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSF1RP07333 AP001094.4-201ENST00000579008 2176 ntBASIC20.6■□□□□ 0.89
CSF1RP07333 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
CSF1RP07333 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CSF1RP07333 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CSF1RP07333 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
CSF1RP07333 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.59■□□□□ 0.89
CSF1RP07333 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CSF1RP07333 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 MIR943-201ENST00000401286 94 ntBASIC20.59■□□□□ 0.89
CSF1RP07333 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.59■□□□□ 0.89
CSF1RP07333 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.59■□□□□ 0.89
CSF1RP07333 MIR4453-201ENST00000584019 89 ntBASIC20.59■□□□□ 0.89
CSF1RP07333 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.59■□□□□ 0.89
CSF1RP07333 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.59■□□□□ 0.89
CSF1RP07333 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSF1RP07333 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CSF1RP07333 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.59■□□□□ 0.89
CSF1RP07333 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.58■□□□□ 0.89
CSF1RP07333 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.58■□□□□ 0.89
CSF1RP07333 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.58■□□□□ 0.89
CSF1RP07333 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.58■□□□□ 0.89
CSF1RP07333 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.58■□□□□ 0.89
CSF1RP07333 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.58■□□□□ 0.89
CSF1RP07333 AC125807.1-201ENST00000483097 614 ntBASIC20.58■□□□□ 0.89
CSF1RP07333 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.58■□□□□ 0.89
CSF1RP07333 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.58■□□□□ 0.89
CSF1RP07333 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 MIR6080-201ENST00000617359 66 ntBASIC20.58■□□□□ 0.89
CSF1RP07333 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.58■□□□□ 0.89
CSF1RP07333 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSF1RP07333 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 FO538757.1-201ENST00000623083 1397 ntBASIC20.58■□□□□ 0.88
CSF1RP07333 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSF1RP07333 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.58■□□□□ 0.88
CSF1RP07333 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.58■□□□□ 0.88
CSF1RP07333 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.57■□□□□ 0.88
CSF1RP07333 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.57■□□□□ 0.88
CSF1RP07333 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.57■□□□□ 0.88
CSF1RP07333 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSF1RP07333 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.57■□□□□ 0.88
CSF1RP07333 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms