Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PDGFAP04085 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDGFAP04085 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PDGFAP04085 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PDGFAP04085 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 FAM185BP-201ENST00000443595 716 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.84■□□□□ 0.13
PDGFAP04085 AC025678.2-201ENST00000562061 970 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 AL390955.2-201ENST00000603032 514 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 ACTL9-202ENST00000612068 1252 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFAP04085 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFAP04085 FLJ38576-201ENST00000623820 2459 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PDGFAP04085 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PDGFAP04085 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFAP04085 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PDGFAP04085 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.83■□□□□ 0.13
PDGFAP04085 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFAP04085 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 AC002558.1-201ENST00000488906 803 ntBASIC15.83■□□□□ 0.12
PDGFAP04085 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.83■□□□□ 0.12
PDGFAP04085 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.83■□□□□ 0.12
PDGFAP04085 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFAP04085 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFAP04085 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
PDGFAP04085 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFAP04085 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.82■□□□□ 0.12
PDGFAP04085 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PDGFAP04085 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PDGFAP04085 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFAP04085 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 AC092474.2-201ENST00000424288 719 ntBASIC15.82■□□□□ 0.12
PDGFAP04085 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFAP04085 AL513480.1-201ENST00000451731 511 ntBASIC15.82■□□□□ 0.12
PDGFAP04085 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.82■□□□□ 0.12
PDGFAP04085 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.82■□□□□ 0.12
PDGFAP04085 MIR4745-201ENST00000577608 62 ntBASIC15.82■□□□□ 0.12
PDGFAP04085 AC138761.1-201ENST00000584393 385 ntBASIC15.82■□□□□ 0.12
PDGFAP04085 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFAP04085 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFAP04085 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms