Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND3P03897 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND3P03897 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MT-ND3P03897 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
MT-ND3P03897 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
MT-ND3P03897 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 POM121L3P-201ENST00000419331 1163 ntBASIC17.27■□□□□ 0.36
MT-ND3P03897 MINOS1P3-201ENST00000457048 203 ntBASIC17.27■□□□□ 0.36
MT-ND3P03897 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.27■□□□□ 0.36
MT-ND3P03897 AL160237.2-201ENST00000556165 472 ntBASIC17.27■□□□□ 0.36
MT-ND3P03897 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.27■□□□□ 0.36
MT-ND3P03897 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND3P03897 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MT-ND3P03897 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MT-ND3P03897 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.27■□□□□ 0.35
MT-ND3P03897 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.27■□□□□ 0.35
MT-ND3P03897 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND3P03897 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
MT-ND3P03897 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
MT-ND3P03897 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MT-ND3P03897 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND3P03897 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND3P03897 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.26■□□□□ 0.35
MT-ND3P03897 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MT-ND3P03897 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.26■□□□□ 0.35
MT-ND3P03897 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MT-ND3P03897 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.26■□□□□ 0.35
MT-ND3P03897 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MT-ND3P03897 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.26■□□□□ 0.35
MT-ND3P03897 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.26■□□□□ 0.35
MT-ND3P03897 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
MT-ND3P03897 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.26■□□□□ 0.35
MT-ND3P03897 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 NSUN5P1-202ENST00000421140 1535 ntBASIC17.26■□□□□ 0.35
MT-ND3P03897 NSUN5P2-203ENST00000457352 1529 ntBASIC17.26■□□□□ 0.35
MT-ND3P03897 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND3P03897 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND3P03897 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND3P03897 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MT-ND3P03897 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND3P03897 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND3P03897 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms