Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.3■■□□□ 1
APBA3O96018 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APBA3O96018 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.3■■□□□ 1
APBA3O96018 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.3■■□□□ 1
APBA3O96018 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.3■■□□□ 1
APBA3O96018 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.3■■□□□ 1
APBA3O96018 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APBA3O96018 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.3■■□□□ 1
APBA3O96018 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.29■■□□□ 1
APBA3O96018 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.29■■□□□ 1
APBA3O96018 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.29■■□□□ 1
APBA3O96018 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.29■■□□□ 1
APBA3O96018 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.29■■□□□ 1
APBA3O96018 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
APBA3O96018 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
APBA3O96018 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
APBA3O96018 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.29■■□□□ 1
APBA3O96018 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.29■■□□□ 1
APBA3O96018 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.29■■□□□ 1
APBA3O96018 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.29■■□□□ 1
APBA3O96018 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.29■■□□□ 1
APBA3O96018 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.29■■□□□ 1
APBA3O96018 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
APBA3O96018 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.29■■□□□ 1
APBA3O96018 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
APBA3O96018 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
APBA3O96018 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
APBA3O96018 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
APBA3O96018 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
APBA3O96018 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
APBA3O96018 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.28■■□□□ 1
APBA3O96018 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.28■■□□□ 1
APBA3O96018 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.28■■□□□ 1
APBA3O96018 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.28■■□□□ 1
APBA3O96018 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.28■■□□□ 1
APBA3O96018 AC106872.11-201ENST00000605838 421 ntBASIC21.28■■□□□ 1
APBA3O96018 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
APBA3O96018 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APBA3O96018 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
APBA3O96018 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.27■■□□□ 1
APBA3O96018 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.27■■□□□ 1
APBA3O96018 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
APBA3O96018 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
APBA3O96018 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APBA3O96018 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
APBA3O96018 SLC25A24P2-201ENST00000415059 510 ntBASIC21.27■■□□□ 1
APBA3O96018 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
APBA3O96018 C2orf69P2-201ENST00000562032 1123 ntBASIC21.27■■□□□ 1
APBA3O96018 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.27■■□□□ 1
APBA3O96018 AL022328.1-201ENST00000610050 478 ntBASIC21.27■■□□□ 1
APBA3O96018 MIR6069-201ENST00000620069 79 ntBASIC21.27■■□□□ 1
APBA3O96018 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.27■■□□□ 1
APBA3O96018 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APBA3O96018 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBA3O96018 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.27■■□□□ 1
APBA3O96018 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.27■■□□□ 1
APBA3O96018 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBA3O96018 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.27■□□□□ 0.99
APBA3O96018 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
APBA3O96018 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.27■□□□□ 0.99
APBA3O96018 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.27■□□□□ 0.99
APBA3O96018 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
APBA3O96018 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.26■□□□□ 0.99
APBA3O96018 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.26■□□□□ 0.99
APBA3O96018 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.26■□□□□ 0.99
APBA3O96018 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APBA3O96018 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
APBA3O96018 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APBA3O96018 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
APBA3O96018 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBA3O96018 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBA3O96018 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms