Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
GGPS1O95749 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GGPS1O95749 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GGPS1O95749 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 MIR770-201ENST00000390219 98 ntBASIC18.9■□□□□ 0.62
GGPS1O95749 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.9■□□□□ 0.62
GGPS1O95749 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.9■□□□□ 0.62
GGPS1O95749 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.9■□□□□ 0.62
GGPS1O95749 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GGPS1O95749 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.9■□□□□ 0.62
GGPS1O95749 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 LINC02012-201ENST00000608206 1725 ntBASIC18.9■□□□□ 0.62
GGPS1O95749 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.9■□□□□ 0.62
GGPS1O95749 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
GGPS1O95749 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GGPS1O95749 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.89■□□□□ 0.62
GGPS1O95749 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.89■□□□□ 0.62
GGPS1O95749 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.89■□□□□ 0.62
GGPS1O95749 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 AC108860.2-201ENST00000562760 2183 ntBASIC18.89■□□□□ 0.62
GGPS1O95749 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
GGPS1O95749 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GGPS1O95749 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
GGPS1O95749 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.89■□□□□ 0.61
GGPS1O95749 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.89■□□□□ 0.61
GGPS1O95749 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.89■□□□□ 0.61
GGPS1O95749 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
GGPS1O95749 WASH6P-202ENST00000359512 1437 ntBASIC18.89■□□□□ 0.61
GGPS1O95749 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
GGPS1O95749 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 AL023806.1-201ENST00000603994 1649 ntBASIC18.89■□□□□ 0.61
GGPS1O95749 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GGPS1O95749 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GGPS1O95749 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GGPS1O95749 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 FZD10-202ENST00000539839 3282 ntBASIC18.88■□□□□ 0.61
GGPS1O95749 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.88■□□□□ 0.61
GGPS1O95749 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.88■□□□□ 0.61
GGPS1O95749 IGHV3-62-201ENST00000520057 340 ntBASIC18.88■□□□□ 0.61
GGPS1O95749 LINC01225-203ENST00000563550 1244 ntBASIC18.88■□□□□ 0.61
GGPS1O95749 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.88■□□□□ 0.61
GGPS1O95749 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 CYP2A7P1-201ENST00000595391 815 ntBASIC18.88■□□□□ 0.61
GGPS1O95749 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 Z92544.3-201ENST00000624747 417 ntBASIC18.88■□□□□ 0.61
GGPS1O95749 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.88■□□□□ 0.61
GGPS1O95749 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GGPS1O95749 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GGPS1O95749 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.87■□□□□ 0.61
GGPS1O95749 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms