Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.04■□□□□ -0
CNOT4O95628 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CNOT4O95628 AC007967.2-201ENST00000432613 625 ntBASIC15.04■□□□□ -0
CNOT4O95628 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.04■□□□□ -0
CNOT4O95628 AC002347.1-201ENST00000569543 541 ntBASIC15.04■□□□□ -0
CNOT4O95628 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
CNOT4O95628 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.03■□□□□ -0
CNOT4O95628 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 AC002310.6-201ENST00000624451 1377 ntBASIC15.03■□□□□ -0
CNOT4O95628 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.03■□□□□ -0
CNOT4O95628 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.03■□□□□ -0
CNOT4O95628 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 AC004832.2-201ENST00000426397 482 ntBASIC15.03■□□□□ -0
CNOT4O95628 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.03■□□□□ -0
CNOT4O95628 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 AC124947.2-201ENST00000547118 1133 ntBASIC15.03■□□□□ -0
CNOT4O95628 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
CNOT4O95628 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 OR7E47P-204ENST00000575924 449 ntBASIC15.03■□□□□ -0
CNOT4O95628 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.03■□□□□ -0
CNOT4O95628 AC007064.4-201ENST00000637740 555 ntBASIC15.03■□□□□ -0
CNOT4O95628 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CNOT4O95628 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT4O95628 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.03■□□□□ -0
CNOT4O95628 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
CNOT4O95628 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.02■□□□□ -0
CNOT4O95628 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.02■□□□□ -0
CNOT4O95628 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CNOT4O95628 SLC25A1P3-201ENST00000395415 828 ntBASIC15.02■□□□□ -0
CNOT4O95628 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.02■□□□□ -0
CNOT4O95628 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.02■□□□□ -0
CNOT4O95628 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.02■□□□□ -0
CNOT4O95628 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.02■□□□□ -0
CNOT4O95628 RHOQP3-201ENST00000437982 621 ntBASIC15.02■□□□□ -0
CNOT4O95628 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.02■□□□□ -0
CNOT4O95628 CXCL1P1-201ENST00000502804 216 ntBASIC15.02■□□□□ -0
CNOT4O95628 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms