Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX6O95503 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CBX6O95503 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CBX6O95503 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 SEC1P-202ENST00000473944 940 ntBASIC16.91■□□□□ 0.3
CBX6O95503 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 AC008687.5-201ENST00000593746 558 ntBASIC16.91■□□□□ 0.3
CBX6O95503 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.91■□□□□ 0.3
CBX6O95503 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX6O95503 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX6O95503 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX6O95503 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX6O95503 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CBX6O95503 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.9■□□□□ 0.3
CBX6O95503 AC092384.3-202ENST00000564646 2873 ntBASIC16.9■□□□□ 0.3
CBX6O95503 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX6O95503 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.9■□□□□ 0.3
CBX6O95503 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX6O95503 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX6O95503 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.9■□□□□ 0.3
CBX6O95503 LINC00265-3P-201ENST00000447588 903 ntBASIC16.9■□□□□ 0.3
CBX6O95503 FOSL1P1-201ENST00000511041 816 ntBASIC16.9■□□□□ 0.3
CBX6O95503 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX6O95503 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX6O95503 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.9■□□□□ 0.3
CBX6O95503 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX6O95503 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX6O95503 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.9■□□□□ 0.3
CBX6O95503 AL157888.1-201ENST00000631930 593 ntBASIC16.9■□□□□ 0.3
CBX6O95503 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CBX6O95503 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX6O95503 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CBX6O95503 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CBX6O95503 AL391807.1-203ENST00000604392 2365 ntBASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms