Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AF186192.3-201ENST00000583427 947 ntBASIC14.2□□□□□ -0.14
SIX6O95475 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.2□□□□□ -0.14
SIX6O95475 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SIX6O95475 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.2□□□□□ -0.14
SIX6O95475 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.2□□□□□ -0.14
SIX6O95475 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 AC006058.4-201ENST00000624016 1670 ntBASIC14.2□□□□□ -0.14
SIX6O95475 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIX6O95475 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 FAM45BP-202ENST00000592932 1624 ntBASIC14.19□□□□□ -0.14
SIX6O95475 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SIX6O95475 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.19□□□□□ -0.14
SIX6O95475 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.19□□□□□ -0.14
SIX6O95475 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.19□□□□□ -0.14
SIX6O95475 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 FRMD8P1-201ENST00000440433 1524 ntBASIC14.19□□□□□ -0.14
SIX6O95475 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.19□□□□□ -0.14
SIX6O95475 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SIX6O95475 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIX6O95475 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.18□□□□□ -0.14
SIX6O95475 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 AC138035.3-201ENST00000622706 2791 ntBASIC14.18□□□□□ -0.14
SIX6O95475 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.18□□□□□ -0.14
SIX6O95475 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.18□□□□□ -0.14
SIX6O95475 AC002558.1-201ENST00000488906 803 ntBASIC14.18□□□□□ -0.14
SIX6O95475 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SIX6O95475 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SIX6O95475 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.18□□□□□ -0.14
SIX6O95475 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
SIX6O95475 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIX6O95475 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.18□□□□□ -0.14
SIX6O95475 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIX6O95475 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SIX6O95475 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms