Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 AC109635.5-201ENST00000533593 962 ntBASIC20.09■□□□□ 0.81
MBD4O95243 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.09■□□□□ 0.81
MBD4O95243 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD4O95243 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.08■□□□□ 0.81
MBD4O95243 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD4O95243 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MBD4O95243 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MBD4O95243 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD4O95243 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MBD4O95243 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.08■□□□□ 0.81
MBD4O95243 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MBD4O95243 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.08■□□□□ 0.81
MBD4O95243 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.08■□□□□ 0.81
MBD4O95243 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD4O95243 AC105020.1-201ENST00000435356 2205 ntBASIC20.08■□□□□ 0.8
MBD4O95243 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.08■□□□□ 0.8
MBD4O95243 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MBD4O95243 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MBD4O95243 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 SNX33P1-201ENST00000592116 1762 ntBASIC20.08■□□□□ 0.8
MBD4O95243 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD4O95243 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MBD4O95243 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 AL391256.1-201ENST00000443260 1855 ntBASIC20.07■□□□□ 0.8
MBD4O95243 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
MBD4O95243 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 AL671277.1-201ENST00000429656 993 ntBASIC20.07■□□□□ 0.8
MBD4O95243 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD4O95243 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD4O95243 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MBD4O95243 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MBD4O95243 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD4O95243 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
MBD4O95243 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD4O95243 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD4O95243 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MBD4O95243 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
MBD4O95243 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD4O95243 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.06■□□□□ 0.8
MBD4O95243 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MBD4O95243 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 AC092474.2-201ENST00000424288 719 ntBASIC20.06■□□□□ 0.8
MBD4O95243 AC092183.1-201ENST00000469884 875 ntBASIC20.06■□□□□ 0.8
MBD4O95243 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD4O95243 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.06■□□□□ 0.8
MBD4O95243 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD4O95243 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD4O95243 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms