Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST1O76090 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST1O76090 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST1O76090 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 AL603756.1-201ENST00000606511 2163 ntBASIC17.67■□□□□ 0.42
BEST1O76090 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BEST1O76090 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST1O76090 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST1O76090 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST1O76090 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 AC092474.2-201ENST00000424288 719 ntBASIC17.67■□□□□ 0.42
BEST1O76090 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST1O76090 ADH5P3-201ENST00000433842 1137 ntBASIC17.67■□□□□ 0.42
BEST1O76090 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 AC112191.1-201ENST00000523689 701 ntBASIC17.67■□□□□ 0.42
BEST1O76090 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST1O76090 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST1O76090 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.67■□□□□ 0.42
BEST1O76090 AL031055.1-201ENST00000606362 631 ntBASIC17.67■□□□□ 0.42
BEST1O76090 AP001350.2-201ENST00000625104 1094 ntBASIC17.67■□□□□ 0.42
BEST1O76090 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
BEST1O76090 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST1O76090 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
BEST1O76090 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 AC002056.1-201ENST00000395613 760 ntBASIC17.66■□□□□ 0.42
BEST1O76090 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST1O76090 AC004967.1-201ENST00000453589 447 ntBASIC17.66■□□□□ 0.42
BEST1O76090 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.66■□□□□ 0.42
BEST1O76090 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
BEST1O76090 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST1O76090 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 PCDHA12-202ENST00000613593 2588 ntBASIC17.66■□□□□ 0.42
BEST1O76090 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST1O76090 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST1O76090 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms