Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 RN7SL560P-201ENST00000577943 264 ntBASIC7.42□□□□□ -1.22
USH2AO75445 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC7.42□□□□□ -1.22
USH2AO75445 AL022328.3-201ENST00000607943 679 ntBASIC7.42□□□□□ -1.22
USH2AO75445 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
USH2AO75445 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 AL607033.1-201ENST00000623900 1599 ntBASIC7.42□□□□□ -1.22
USH2AO75445 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 PP14571-201ENST00000404327 934 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 MEP1AP4-201ENST00000423244 1087 ntBASIC7.42□□□□□ -1.22
USH2AO75445 RPL13AP19-201ENST00000434320 584 ntBASIC7.42□□□□□ -1.22
USH2AO75445 AC069218.1-201ENST00000435269 762 ntBASIC7.42□□□□□ -1.22
USH2AO75445 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC7.42□□□□□ -1.22
USH2AO75445 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
USH2AO75445 AC020914.3-201ENST00000594712 304 ntBASIC7.42□□□□□ -1.22
USH2AO75445 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC7.42□□□□□ -1.22
USH2AO75445 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USH2AO75445 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 FST-202ENST00000396947 2538 ntTSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 FAM220BP-201ENST00000377689 816 ntBASIC7.41□□□□□ -1.22
USH2AO75445 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 AC114501.1-201ENST00000445949 172 ntBASIC7.41□□□□□ -1.22
USH2AO75445 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 AL591846.1-201ENST00000451736 433 ntBASIC7.41□□□□□ -1.22
USH2AO75445 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC7.41□□□□□ -1.22
USH2AO75445 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 AC073439.1-201ENST00000624121 1774 ntBASIC7.41□□□□□ -1.22
USH2AO75445 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
USH2AO75445 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 TIMM17BP1-201ENST00000545713 516 ntBASIC7.41□□□□□ -1.22
USH2AO75445 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC7.41□□□□□ -1.22
USH2AO75445 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC7.41□□□□□ -1.22
USH2AO75445 FOS-202ENST00000535987 1402 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC7.41□□□□□ -1.22
USH2AO75445 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
USH2AO75445 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms