Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 AL671710.1-201ENST00000610245 2349 ntBASIC17.09■□□□□ 0.33
PRAMEF11O60813 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 AC004832.2-201ENST00000426397 482 ntBASIC17.09■□□□□ 0.33
PRAMEF11O60813 AC074386.1-202ENST00000463561 864 ntBASIC17.09■□□□□ 0.33
PRAMEF11O60813 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF11O60813 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF11O60813 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF11O60813 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRAMEF11O60813 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRAMEF11O60813 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF11O60813 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF11O60813 AGGF1P2-201ENST00000426656 2106 ntBASIC17.08■□□□□ 0.33
PRAMEF11O60813 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF11O60813 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.08■□□□□ 0.33
PRAMEF11O60813 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF11O60813 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF11O60813 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEF11O60813 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 KRT8P39-201ENST00000396270 1433 ntBASIC17.08■□□□□ 0.32
PRAMEF11O60813 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 RNU1-129P-201ENST00000384064 167 ntBASIC17.08■□□□□ 0.32
PRAMEF11O60813 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 U1.21-201ENST00000580816 167 ntBASIC17.08■□□□□ 0.32
PRAMEF11O60813 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF11O60813 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF11O60813 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF11O60813 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF11O60813 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms