Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ITM2AO43736 AC246785.2-201ENST00000432512 513 ntBASIC16.61■□□□□ 0.25
ITM2AO43736 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.61■□□□□ 0.25
ITM2AO43736 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.61■□□□□ 0.25
ITM2AO43736 AC063952.2-201ENST00000498792 1227 ntBASIC16.61■□□□□ 0.25
ITM2AO43736 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.61■□□□□ 0.25
ITM2AO43736 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ITM2AO43736 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
ITM2AO43736 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
ITM2AO43736 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.61■□□□□ 0.25
ITM2AO43736 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITM2AO43736 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.61■□□□□ 0.25
ITM2AO43736 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ITM2AO43736 PMPCAP1-201ENST00000508114 1576 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.6■□□□□ 0.25
ITM2AO43736 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.6■□□□□ 0.25
ITM2AO43736 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.6■□□□□ 0.25
ITM2AO43736 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.6■□□□□ 0.25
ITM2AO43736 ACTG1P4-201ENST00000425123 1122 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ITM2AO43736 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ITM2AO43736 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.6■□□□□ 0.25
ITM2AO43736 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.6■□□□□ 0.25
ITM2AO43736 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 AL596087.1-201ENST00000400979 1969 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.6■□□□□ 0.25
ITM2AO43736 TP73-AS1-210ENST00000637775 1455 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 AC004817.3-201ENST00000602957 2129 ntBASIC16.6■□□□□ 0.25
ITM2AO43736 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITM2AO43736 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.59■□□□□ 0.25
ITM2AO43736 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
ITM2AO43736 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ITM2AO43736 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ITM2AO43736 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.59■□□□□ 0.25
ITM2AO43736 AP002414.1-201ENST00000391405 1147 ntBASIC16.59■□□□□ 0.25
ITM2AO43736 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.59■□□□□ 0.25
ITM2AO43736 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.59■□□□□ 0.25
ITM2AO43736 KRT8P26-201ENST00000534154 1276 ntBASIC16.59■□□□□ 0.25
ITM2AO43736 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ITM2AO43736 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITM2AO43736 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITM2AO43736 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITM2AO43736 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ITM2AO43736 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ITM2AO43736 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITM2AO43736 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ITM2AO43736 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITM2AO43736 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms